Human (NA12878)

Homo_sapiens_wgs - Genome Reference Consortium

Homo sapiens

The HsapALLPATHS1 (GCA_000185165.1 assembly is an ALLPATHS assembly of Illumina reads from the NA12878 individual, released in 2011.

Example region

Genome assembly: CURRENT

More information and statistics (N50, Coverage, BUSCO)

Retrieve a live status of the current tiling path using the tool Chromoview

Display your data in gEVAL

Punchlist Overview

Punchlists

The Human Punchlists are automated lists created to facilitate identification of and navigation to common issues or regions of interest.

Examples include:

  • Gap Locations
  • Overlap Issues
  • Clone Spanning Locations

If you would like to recommend a punchlist to be added to a specific organism or in general please contact us

The Genome Reference Consortium

The Human gEVAL is maintained and improved by the Genome Reference Consortium (GRC)

Jira Ticketing System: Jira is the ticketing tracking system used by the GRC for genome issues. This can be a gap, path, variation, gene or other issues submitted by external users

List of Jira issues for Human

Comparative genomics

gEVAL provides intra-species alignments. This is available for intermediate builds, major reference releases, and WGS/NGS assemblies.

More about comparative analysis