Human (HX1_1_1)
Homo_sapiens - Genome Reference Consortium
The HX1_1.1 (GCA_001708065.2) assembly is a Pacbio sequenced, Bionano scaffolded, Falcon assembled assembly from a chinese individual (HuaXia1-HX1) from the Wang Lab at the University of Southern California.
Raw datasets, assemblies and further analyses can be found here.
For more information please refer to the publication Nature Communications 7, Article number: 12065 (2016).
Example region
More information and statistics (N50, Coverage, BUSCO)
Retrieve a live status of the current tiling path using the tool Chromoview
Display your data in gEVAL
Punchlist OverviewPunchlists
The Human Punchlists are automated lists created to facilitate identification of and navigation to common issues or regions of interest.
Examples include:
- Gap Locations
- Overlap Issues
- Clone Spanning Locations
If you would like to recommend a punchlist to be added to a specific organism or in general please contact us
The Genome Reference Consortium
The Human gEVAL is maintained and improved by the Genome Reference Consortium (GRC)
Jira Ticketing System: Jira is the ticketing tracking system used by the GRC for genome issues. This can be a gap, path, variation, gene or other issues submitted by external users
Comparative genomics
gEVAL provides intra-species alignments. This is available for intermediate builds, major reference releases, and WGS/NGS assemblies.