| Punch Type | Description | no of entries |
|---|---|---|
| True gap(s) | description not available | 605 |
| Incomplete Transcripts ccds | Incomplete coverage of ccds transcript mappings | 200 |
| Incomplete Transcripts refseq | Incomplete coverage of refseq transcript mappings | 42 |
| JIRA ticket(s) | description not available | 1791 |
| Clone-contig wrong chr | Markers suggest all or part of a clone-contig may be on the wrong chromosome | 128 |
| Clone-contig misordering | Markers suggest clone-contigs may be in the wrong order | 28 |
| Clone-contig misorientation | Markers suggest a clone-contig may be in the wrong orientation | 12 |
| High variation overlap(s) | description not available | 1933 |
| Transcript Orphans ccds | Near perfect ccds transcript mappings not mapped on primary components | 2 |
| Transcript Orphans refseq | Near perfect refseq transcript mappings not mapped on primary components | 17 |
Punchlist(s)
Overview- True gap(s)
- Incomplete Transcripts ccds
- Incomplete Transcripts refseq
- JIRA ticket(s)
- Clone-contig wrong chr
- Clone-contig misordering
- Clone-contig misorientation
- High variation overlap(s)
- Transcript Orphans ccds
- Transcript Orphans refseq
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