Human (20140826)
Homo_sapiens - Genome Reference Consortium
Assembly
The human gEVAL viewer provides data set which is more current than GRCh37. The difference between this viewer and the human AGP viewer is the AGP viewer is based on the GRCh37, an assembly built on March 2009, whereas the gEVAL viewer is a more current snapshot. It also includes clones that are in the sequencing/finishing pipelines and have just been submitted (as of the date of this build).
The Genome Reference Consortium (GRC) maintains and improves the assembly.
A live status of the current tiling path can be found using the webtool Chromoview.
Manual annotations of the human genome can be found in
Vega
View karyotype
Example region
More information and statistics (N50, Coverage, BUSCO)
Retrieve a live status of the current tiling path using the tool Chromoview
Display your data in gEVAL
Punchlist OverviewPunchlists
The Human Punchlists are automated lists created to facilitate identification of and navigation to common issues or regions of interest.
Examples include:
- Gap Locations
- Overlap Issues
- Clone Spanning Locations
If you would like to recommend a punchlist to be added to a specific organism or in general please contact us
The Genome Reference Consortium
The Human gEVAL is maintained and improved by the Genome Reference Consortium (GRC)
Jira Ticketing System: Jira is the ticketing tracking system used by the GRC for genome issues. This can be a gap, path, variation, gene or other issues submitted by external users
Comparative genomics
gEVAL provides intra-species alignments. This is available for intermediate builds, major reference releases, and WGS/NGS assemblies.