Chicken (Galgal4)

Gallus_gallus -
GCA_000002315.2

Chicken

The Gallus_gallus-4.0 assembly of the chicken genome was produced in November 2011 by the International Chicken Genome Consortium. It consists of 31 chromosomes, 2 linkage groups and 14,093 unplaced scaffolds.

The genome assembly represented here corresponds to GenBank Assembly ID GCA_000002315.2.

View karyotype Example region

Genome assembly: Nov 2011 (GCA_000002315.2)

More information and statistics (N50, Coverage, BUSCO)

Retrieve a live status of the current tiling path using the tool Chromoview

Display your data in gEVAL

Punchlist Overview

Punchlists

The Chicken Punchlists are automated lists created to facilitate identification of and navigation to common issues or regions of interest.

Examples include:

  • Gap Locations
  • Overlap Issues
  • Clone Spanning Locations

If you would like to recommend a punchlist to be added to a specific organism or in general please contact us

The Genome Reference Consortium

The Chicken gEVAL is maintained and improved by the Genome Reference Consortium (GRC)

Jira Ticketing System: Jira is the ticketing tracking system used by the GRC for genome issues. This can be a gap, path, variation, gene or other issues submitted by external users

List of Jira issues for Chicken

Comparative genomics

gEVAL provides intra-species alignments. This is available for intermediate builds, major reference releases, and WGS/NGS assemblies.

More about comparative analysis